Publications 2026 A Genome‑Wide Screen in E. coli Reveals Metabolic Adaptations that Enhance Intratumoral Fitness and Bacterial Cancer Therapy Efficacy Protocol for Model Calibration and Selection based on the Dynamics of First and Second Moments from Experimental Data Model Criticism via Stochastic Optimization Anterior Cingulate Feedback Facilitates Rapid Global Context Modulation in Primary Visual Cortex. Single-Cell Tumour Phylogenetics RECAP: Representation-Based Calibration with Amortized Pooling for Frequentist Simulation-Based Inference. Boundary Detection for High-Dimensional Point Clouds Controllable Diverse Sampling through Pullback Directions Wavelet-Based Whole Genome Doubling Aware Single-Cell Copy Number Calling. The Reference Set Is Not the Answer Set: GEOM-DRUGS Is Missing Low-Energy Conformers on Its Own Energy Surface. The Polytopal Neural Network Efficient and Generalizable Archetypal Analysis for Discrete Data Automatic Perturbation Kernels for Biological Applications of Approximate Bayesian Computation Sequential Monte Carlo with Random Forests Warm-Starting PDE Solvers with Any-Dimensional Machine Learning SHERLOCK: Structured Representation Learning and Causal Inference of Downstream Perturbation Effects MMEJ Repair of Breaks at TA Repeats Maintains ecDNA and Cancer Fitness Harnessing Biological Variability for Mechanistic Inference: A Stochastic Framework Applied to Neural Stem Cell Dynamics Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease The UVA-Induced Single-Base Mutational Signature of CX-5461 in Human Cells ARCADIA Reveals Spatially Dependent Transcriptional Programs through Integration of scRNA-Seq and Spatial Proteomics Primary Tumor Genomics and Patterns of Distant Recurrence in Resected Gastric Cancer Simulation-Based Empirical Bayes PLA2G2F Suppresses Ferroptosis through Phospholipid Remodeling Accurate Detection of Tumor Clonality and Ongoing Expansion Mode from Genomic Data Quorum Sensing Underlies the Establishment and Maintenance of Marginal Zone B Cells LYNX: A Deep Generative Model for Linking Spatial Dynamics and Cell Interactions in Multimodal Spatial Data. Jin, Y.; Myers, J.; Rajbhandari, P.; Zhang, J. Y.; Fang, K.; Moazami, J. S.; Hosny, N.; Stockwell, B.; Azizi, E. bioRxiv 2026. Geometric Causal Models Differentiable Design for Morphogenesis I: Simulation and Simulacra COATS Identifies Copy-Number-Dependent Drivers and Enablers of Aneuploidy in Cancer Anterior Lateral Motor Cortex Enables Contextual Decision-Making via Dynamic Reconfiguration of Local Circuits. Featured Publication edit publication {{ name }} . . . Abstract Citation No resultsThere are no publications with the provided filters. Sort Publications By Keyword filter: {{ filter.label }}
A Genome‑Wide Screen in E. coli Reveals Metabolic Adaptations that Enhance Intratumoral Fitness and Bacterial Cancer Therapy Efficacy
Protocol for Model Calibration and Selection based on the Dynamics of First and Second Moments from Experimental Data
RECAP: Representation-Based Calibration with Amortized Pooling for Frequentist Simulation-Based Inference.
The Reference Set Is Not the Answer Set: GEOM-DRUGS Is Missing Low-Energy Conformers on Its Own Energy Surface.
Automatic Perturbation Kernels for Biological Applications of Approximate Bayesian Computation Sequential Monte Carlo with Random Forests
Harnessing Biological Variability for Mechanistic Inference: A Stochastic Framework Applied to Neural Stem Cell Dynamics
Spatiotemporal Single-Cell Profiling Reveals T Cell Clonal Dynamics and Phenotypic Plasticity in Human Graft-versus-Host Disease
ARCADIA Reveals Spatially Dependent Transcriptional Programs through Integration of scRNA-Seq and Spatial Proteomics
LYNX: A Deep Generative Model for Linking Spatial Dynamics and Cell Interactions in Multimodal Spatial Data. Jin, Y.; Myers, J.; Rajbhandari, P.; Zhang, J. Y.; Fang, K.; Moazami, J. S.; Hosny, N.; Stockwell, B.; Azizi, E. bioRxiv 2026.
Anterior Lateral Motor Cortex Enables Contextual Decision-Making via Dynamic Reconfiguration of Local Circuits.
